The detailed information of tRNA gene sequence


Sequence ID>WENV170718265
Genome IDLSQX01068736
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7640
End posion on genome 7565
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccataggg
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCACCTGCCTTGCACGCAGGGGGTCAAGAGTTCGAGT
CTCTTTATCTCCACCA
Downstream region at tRNA end position 
tatttaaaaa
Secondary structure (Cloverleaf model)
>WENV170718265	Ala	TGC
                   g      ACCA tatttaaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G + T          T G
                    T     T T C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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