The detailed information of tRNA gene sequence


Sequence ID>WENV170718340
Genome IDLSQX01071925
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 243
End posion on genome 167
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttgctcatt
tRNA gene sequence 
GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
TCCCGTCCATACCGCAA
Downstream region at tRNA end position 
aaaaaagggt
Secondary structure (Cloverleaf model)
>WENV170718340	Asp	GTC
                   t      GCAA aaaaaagggt
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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