The detailed information of tRNA gene sequence


Sequence ID>WENV170718358
Genome IDLSQX01072434
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 203
End posion on genome 278
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattgacgc
tRNA gene sequence 
CGCGGGGTAGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCAGGGGTTCAAAT
CCCCTCCCCGCAACCA
Downstream region at tRNA end position 
agtaaattca
Secondary structure (Cloverleaf model)
>WENV170718358	Met	CAT
                   c      ACCA agtaaattca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       C G A G       A G G G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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