The detailed information of tRNA gene sequence


Sequence ID>WENV170718365
Genome IDLSQX01072540
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7180
End posion on genome 7255
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agattgataT
tRNA gene sequence 
TCCCTAGTAGCTCAGTCGGTTAGAGCGGCGGACTGTTAATCCGTAGGTCGTAGGTTCAAG
TCCTACCTGGGGAGGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170718365	Asn	GTT
                   T      GGnn nnnnnnnnnn
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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