The detailed information of tRNA gene sequence


Sequence ID>WENV170718394
Genome IDLSQX01074205
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6347
End posion on genome 6423
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcgcaagt
tRNA gene sequence 
GGAGCTGTAGTGTAGTGGTCTAACATGCCGGCCTGTCACGCCGGAGATCGCGGGTTCGAC
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
taatatgccg
Secondary structure (Cloverleaf model)
>WENV170718394	Asp	GTC
                   t      GCCA taatatgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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