The detailed information of tRNA gene sequence


Sequence ID>WENV170718420
Genome IDLSQX01074868
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6355
End posion on genome 6283
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaggtgtatc
tRNA gene sequence 
GGGCCCGTAGCATAGCCGGTGGTGCACCCGGCTGATAACCGGGAGGTCATGCGTTCGAAT
CGCATCGGGCCCAtcg
Downstream region at tRNA end position 
ttctttcatc
Secondary structure (Cloverleaf model)
>WENV170718420	Ile	GAT
                   c      Atcg ttctttcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G C G     C
    G       + | | |                 T T
    G       G T G C
      T G          A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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