The detailed information of tRNA gene sequence


Sequence ID>WENV170718436
Genome IDLSQX01075402
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3374
End posion on genome 3297
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tcatgttatt
tRNA gene sequence 
GCGCTCGTAGCTCAGCCTGGATAGAGCACAACCCTCCGAAGGTTGGGGTCGGACGTTCAA
ATCGTCTCGAGCGCGCCA
Downstream region at tRNA end position 
accatagata
Secondary structure (Cloverleaf model)
>WENV170718436	Arg	CCG
                   t      GCCA accatagata
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C T G C     A
    C C G A        A      + | | | |     A
  T         C T C G       G G A C G     C
  G         | | | |                 T T
  G         G A G C
    A T A          A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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