The detailed information of tRNA gene sequence


Sequence ID>WENV170718510
Genome IDLSQX01079009
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11289
End posion on genome 11365
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
caagcatcgc
tRNA gene sequence 
GCGCCGGTAGCTCAATTGGATAGAGCATCGGACTACGGATCCGAAGGTTACGGGTTCGAC
TCCTGTCCGGCGCGCCA
Downstream region at tRNA end position 
ttaaaatagg
Secondary structure (Cloverleaf model)
>WENV170718510	Arg	ACG
                   c      GCCA ttaaaatagg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     T G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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