The detailed information of tRNA gene sequence


Sequence ID>WENV170718511
Genome IDLSQX01079053
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12513
End posion on genome 12440
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcggcagcga
tRNA gene sequence 
GCACCTCTAGCTCAATAGGTAGAGCAACTGACTCTTAATCAGTGGGTTCCGGGTTCGAGT
CCCGGGGGGTGTACtg
Downstream region at tRNA end position 
ctcaccacac
Secondary structure (Cloverleaf model)
>WENV170718511	Lys	CTT
                   a      ACtg ctcaccacac
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G G C C C     A
      T A A        A      | | | | |     G
    A       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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