The detailed information of tRNA gene sequence


Sequence ID>WENV170718528
Genome IDLSQX01080354
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3052
End posion on genome 2978
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaaaaattat
tRNA gene sequence 
TCCCTAGTAGCTCAGTCGGTTAGAGCGGCGGACTGTTAATCCGTAGGTCGTAGGTTCAAG
TCCTACCTGGGGAGCtt
Downstream region at tRNA end position 
ctttataaaa
Secondary structure (Cloverleaf model)
>WENV170718528	Asn	GTT
                   t      GCtt ctttataaaa
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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