The detailed information of tRNA gene sequence


Sequence ID>WENV170718542
Genome IDLSQX01080706
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1586
End posion on genome 1662
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctctgtgatT
tRNA gene sequence 
GGGGACGTAGCTCAATTGGTTAGAGCATCGGACTGTCGATCCGAAGGTTGAGGGTTCGAG
CCCCTTCGTCCTCGTCt
Downstream region at tRNA end position 
tgtaaagcct
Secondary structure (Cloverleaf model)
>WENV170718542	Asp	GTC
                   T      GTCt tgtaaagcct
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T T C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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