The detailed information of tRNA gene sequence


Sequence ID>WENV170718620
Genome IDLSQX01083655
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4744
End posion on genome 4820
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagcacccgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTCGAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
attcaccacg
Secondary structure (Cloverleaf model)
>WENV170718620	Met	CAT
                   t      ACCA attcaccacg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     G
    T       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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