The detailed information of tRNA gene sequence


Sequence ID>WENV170718725
Genome IDLSQX01088507
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 981
End posion on genome 1056
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgatagtac
tRNA gene sequence 
AGCGGGGTGGGGTAGTCTGGTGATCCCGCGGGGCTCATAACCCCGAGATCCCTAGTTCAA
ATCTAGGCCCTGCTACtt
Downstream region at tRNA end position 
ttaattaata
Secondary structure (Cloverleaf model)
>WENV170718725	Met	CAT
                   c      ACtt ttaattaata
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C
                     G - C
                     G - C          T A
                    T     G G A T C     A
    C T G A        G      | | | | |     A
  T         T G G G       C C T A G     C
  G           | | |                 T T
  G         T C C C
    T G A          G     AGATC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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