The detailed information of tRNA gene sequence


Sequence ID>WENV170718765
Genome IDLSQX01090088
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5621
End posion on genome 5548
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tattaactcT
tRNA gene sequence 
GGACTTGTGGGGTAGTGGATATCCTTTCGGGCTTCGAACCCGAAGAACCGGGTTCGATCC
CCGGCAGGTCCGTgg
Downstream region at tRNA end position 
cgtgccttac
Secondary structure (Cloverleaf model)
>WENV170718765	Arg	TCG
                   T      GTgg cgtgccttac
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T - A
                     G - C          C T
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T G G G       C C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          T     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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