The detailed information of tRNA gene sequence


Sequence ID>WENV170718789
Genome IDLSQX01090672
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11388
End posion on genome 11316
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aaataaaaaa
tRNA gene sequence 
GGCCCCATAGTTCAACGGATAGAACAAAAGTTTCCTAAACTTTAGATCCAAGTTCGATTC
TTGGTGGGGCTACtt
Downstream region at tRNA end position 
ctttttatac
Secondary structure (Cloverleaf model)
>WENV170718789	Arg	CCT
                   a      ACtt ctttttatac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G G T T C     A
      C A A        A      | | | | |     G
    G       C T T G       C C A A G     C
    G       | | | |                 T T
    A       G A A C
      T A          A     AGAT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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