The detailed information of tRNA gene sequence


Sequence ID>WENV170718796
Genome IDLSQX01091021
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2795
End posion on genome 2719
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaaaaaaac
tRNA gene sequence 
GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
TCCCGTCCATACCGCCA
Downstream region at tRNA end position 
aaagtcaagt
Secondary structure (Cloverleaf model)
>WENV170718796	Asp	GTC
                   c      GCCA aaagtcaagt
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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