The detailed information of tRNA gene sequence


Sequence ID>WENV170718811
Genome IDLSQX01091279
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1358
End posion on genome 1448
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agttgtccgc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCGAAGGTGATCGCCTCGAAAGCGATTGTTGGGTAACCCCCA
ACCGCGGGTTCAAATCCCGCCGCCACCGCCA
Downstream region at tRNA end position 
gcagaggatc
Secondary structure (Cloverleaf model)
>WENV170718811	Ser	CGA
                   c      GCCA gcagaggatc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G C G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTTGGGTAACCCCCAACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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