The detailed information of tRNA gene sequence


Sequence ID>WENV170718927
Genome IDLSQX01095486
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1642
End posion on genome 1567
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttgcttggac
tRNA gene sequence 
GGCCCCATCGTCTAGCGGCCTAGGACACTGGCCTCTCACGCCGGTAACAGGGGTTCGAGT
CCCCTTGGGGTCACCA
Downstream region at tRNA end position 
catacacaaa
Secondary structure (Cloverleaf model)
>WENV170718927	Glu	CTC
                   c      ACCA catacacaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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