The detailed information of tRNA gene sequence


Sequence ID>WENV170718998
Genome IDLSQX01098423
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 31688
End posion on genome 31775
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggttcccag
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTAAAACCAGCAGTTTGCTAAACTGCCGTACGGGCAACCGTA
CCGGGGGTTCGAATCCCCCAGCTTCCGCtt
Downstream region at tRNA end position 
tcttaatgca
Secondary structure (Cloverleaf model)
>WENV170718998	Ser	GCT
                   g      GCtt tcttaatgca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T A A        A     CGTACGGGCAACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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