The detailed information of tRNA gene sequence


Sequence ID>WENV170719015
Genome IDLSQX01098754
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 334
End posion on genome 259
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cagccatcta
tRNA gene sequence 
GCCCAGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGCTGGTTCGATT
CCGGCTCTGGGCACCA
Downstream region at tRNA end position 
tgttcggttc
Secondary structure (Cloverleaf model)
>WENV170719015	Phe	GAA
                   a      ACCA tgttcggttc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C G G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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