The detailed information of tRNA gene sequence


Sequence ID>WENV170719022
Genome IDLSQX01099280
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12947
End posion on genome 13031
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
agttcctaaa
tRNA gene sequence 
GCGGATGTGGCGTAATTGGTAGCCGCGTTAGACTTAGGATCTAATGCCGAGAGGCGTGGG
GGTTCGAGTCCCTCCATCCGCACAA
Downstream region at tRNA end position 
aaatagagct
Secondary structure (Cloverleaf model)
>WENV170719022	Leu	TAG
                   a      ACAA aaatagagct
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       T G C G       G G G G G     C
    G         | | |                 T T
    G       C C G C
      T A G        G     TGCCGAGAGGCGT
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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