The detailed information of tRNA gene sequence


Sequence ID>WENV170719027
Genome IDLSQX01099568
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2252
End posion on genome 2164
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acccgaacaa
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCGAAGGTGATCGCCTCGAAAGCGATTGTTGGGTAACCCCCA
ACCGAGGGTTCAAATCCCTCCGCCACCGCag
Downstream region at tRNA end position 
tgtgaaggcc
Secondary structure (Cloverleaf model)
>WENV170719027	Ser	CGA
                   a      GCag tgtgaaggcc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTTGGGTAACCCCCAACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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