The detailed information of tRNA gene sequence


Sequence ID>WENV170719032
Genome IDLSQX01099928
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 95
End posion on genome 19
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaacaacga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCATAGGTTCAAA
TCCTATCCCCGCTACCA
Downstream region at tRNA end position 
cgtgccaaga
Secondary structure (Cloverleaf model)
>WENV170719032	Met	CAT
                   a      ACCA cgtgccaaga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     A
    T       C G A G       A T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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