The detailed information of tRNA gene sequence


Sequence ID>WENV170719182
Genome IDLSQX01104850
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 10524
End posion on genome 10609
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgttatattt
tRNA gene sequence 
GGGAGGGTACCAAAGTGGCCAAATGGGGCAGACTGTAAATCTGCTGACGAACGTCTTCGT
AGGTTCGAATCCTGCCCCTCCCACCA
Downstream region at tRNA end position 
tgcggaagta
Secondary structure (Cloverleaf model)
>WENV170719182	Tyr	GTA
                   t      ACCA tgcggaagta
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | + | | |     G
    G       A A C C       G T A G G     C
    G         | | |                 T T
    C       A T G G
      C A A        G     TGACGAACGTCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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