The detailed information of tRNA gene sequence


Sequence ID>WENV170719188
Genome IDLSQX01104951
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 42530
End posion on genome 42619
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcagtctaa
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCTCGCCTGCTAAGTGAGTGGGGCTTTGCCGCCC
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttaatataa
Secondary structure (Cloverleaf model)
>WENV170719188	Ser	GCT
                   a      GCCA tttaatataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGGGGCTTTGCCGCCCCC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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