The detailed information of tRNA gene sequence


Sequence ID>WENV170719190
Genome IDLSQX01104951
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 71426
End posion on genome 71518
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caacgcaacc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGAAGGCGGTCGACTCGAAATCGATTAGGCGGCTCATACCC
GTCTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gagaatatta
Secondary structure (Cloverleaf model)
>WENV170719190	Ser	CGA
                   c      GCCA gagaatatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGCTCATACCCGTCTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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