The detailed information of tRNA gene sequence


Sequence ID>WENV170719191
Genome IDLSQX01104951
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 79672
End posion on genome 79759
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgccgatag
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGTCGAAGGCGGGCGCTTGGAGAGCGTCTGAACCGCGAGGTTCC
GTGAGTTCGAATCTCACCTTCTCCGCCA
Downstream region at tRNA end position 
tgaatattaa
Secondary structure (Cloverleaf model)
>WENV170719191	Ser	GGA
                   g      GCCA tgaatattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAACCGCGAGGTTCC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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