The detailed information of tRNA gene sequence


Sequence ID>WENV170719195
Genome IDLSQX01104951
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 277087
End posion on genome 277163
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
acttgacacg
tRNA gene sequence 
GTGAGCGTAGCTCAATTGGTTAGAGTGCTGGACTGTGGCTCCAGTGGTTGGGGGTTCAAG
TCCCCTCGCTCACCCCA
Downstream region at tRNA end position 
tttaaaaatt
Secondary structure (Cloverleaf model)
>WENV170719195	His	GTG
                   g      CCCA tttaaaaatt
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T C C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     TGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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