The detailed information of tRNA gene sequence


Sequence ID>WENV170719197
Genome IDLSQX01104951
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 277285
End posion on genome 277360
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tgtttatcgt
tRNA gene sequence 
GGACCGTTAGCTCAATCGGCAGAGCACCTGACTCTTAATCAGGGGGTTACAGGTTCGATT
CCTGTACGGTCCACCA
Downstream region at tRNA end position 
tttcatgcct
Secondary structure (Cloverleaf model)
>WENV170719197	Lys	CTT
                   t      ACCA tttcatgcct
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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