The detailed information of tRNA gene sequence


Sequence ID>WENV170719222
Genome IDLSQX01106037
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2502
End posion on genome 2576
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cggcgaacat
tRNA gene sequence 
GGGCCTGTGGCGCAGCTGGTAGCGCACCTGCATGGCATGCAGGGGGTCAGGGGTTCGAGT
CCCCTCAGGTCCACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170719222	Ala	GGC
                   t      ACCn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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