The detailed information of tRNA gene sequence


Sequence ID>WENV170719242
Genome IDLSQX01106982
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 114993
End posion on genome 114920
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcagcaacac
tRNA gene sequence 
GGGCTCATGGTCTAGTGGTTATGACGTCTCCCTCACACGGAGGAGGTCGCCGGTTCGAAT
CCGGCTGAGCCCACtt
Downstream region at tRNA end position 
ctcttttgcc
Secondary structure (Cloverleaf model)
>WENV170719242	Val	CAC
                   c      ACtt ctcttttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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