The detailed information of tRNA gene sequence


Sequence ID>WENV170719291
Genome IDLSQX01109080
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6244
End posion on genome 6332
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttcagtT
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGCCGAATCGGGCTCCCTGCTAAGGAGTTGACCTGGTAACGGGT
CCGGGGGTTCGAATCCCCCCCTCTCCGGat
Downstream region at tRNA end position 
tttttacaat
Secondary structure (Cloverleaf model)
>WENV170719291	Ser	GCT
                   T      GGat tttttacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGACCTGGTAACGGGTCC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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