The detailed information of tRNA gene sequence


Sequence ID>WENV170719376
Genome IDLSQX01112352
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 18342
End posion on genome 18418
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccaccattt
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGACGGTTCGAG
CCCGTTCCGGGTCGCCA
Downstream region at tRNA end position 
atttgcctcg
Secondary structure (Cloverleaf model)
>WENV170719376	Asp	GTC
                   t      GCCA atttgcctcg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     T T G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A C G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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