The detailed information of tRNA gene sequence


Sequence ID>WENV170719453
Genome IDLSQX01115316
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1120
End posion on genome 1044
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aatgataatt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAC
TCTGCCCAGACCCACCA
Downstream region at tRNA end position 
ttttgtcttt
Secondary structure (Cloverleaf model)
>WENV170719453	Ile	GAT
                   t      ACCA ttttgtcttt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T C
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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