The detailed information of tRNA gene sequence


Sequence ID>WENV170719455
Genome IDLSQX01115365
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9084
End posion on genome 8999
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagaacaagt
tRNA gene sequence 
GGAGGATTAGTCCTAACTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTCTGCCCTTGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
gttttataga
Secondary structure (Cloverleaf model)
>WENV170719455	Ser	TGA
                   t      GCCA gttttataga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTCTGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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