The detailed information of tRNA gene sequence


Sequence ID>WENV170719464
Genome IDLSQX01115485
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 391
End posion on genome 317
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcttcggcaa
tRNA gene sequence 
GCGCCCATCGTCTAGCGGTCAGGACGGCGCCCTCTCACGGCGCAAACAGGGGTTCGATTC
CCCTTGGGCGTGCCA
Downstream region at tRNA end position 
ataaaatcta
Secondary structure (Cloverleaf model)
>WENV170719464	Glu	CTC
                   a      GCCA ataaaatcta
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAC
                    G - C
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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