The detailed information of tRNA gene sequence


Sequence ID>WENV170719573
Genome IDLSQX01118813
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2471
End posion on genome 2388
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aatagggtag
tRNA gene sequence 
GCGAGGGTAGCCAAGCCAGGCCAACGGCGCCAGACTTAAGATCTGGTCTTCAGTAGTTCA
TGGGTTCGAATCCCTTCCCTCGCAttt
Downstream region at tRNA end position 
ttatgaaacc
Secondary structure (Cloverleaf model)
>WENV170719573	Leu	TAA
                   g      Attt ttatgaaacc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      |   | | |     G
  A         A C C G       A T G G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCTTCAGTAGTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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