The detailed information of tRNA gene sequence


Sequence ID>WENV170719666
Genome IDLSQX01122381
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 13394
End posion on genome 13487
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcaccgcgc
tRNA gene sequence 
GGAGTGGTGTCCGAGTTGGCTTAAGGAGCACGACTGGAAATCGTGTAGGCGGGGGTAACT
CGTCTCGAGGGTTCGAATCCCTCCCACTCCGCCA
Downstream region at tRNA end position 
ctcgacccgg
Secondary structure (Cloverleaf model)
>WENV170719666	Ser	GGA
                   c      GCCA ctcgacccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    T T A          G     TAGGCGGGGGTAACTCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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