The detailed information of tRNA gene sequence


Sequence ID>WENV170719808
Genome IDLSQX01129623
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12638
End posion on genome 12710
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctttttgtat
tRNA gene sequence 
GGATTCGTGGTCTAGTGGTATGACGTCGCCTTCACACGGCGAAGGTCAGGAGTTCGAATC
TCCTCGGATCCACtg
Downstream region at tRNA end position 
ttttttggtt
Secondary structure (Cloverleaf model)
>WENV170719808	Val	CAC
                   t      ACtg ttttttggtt
                     G - C
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C          T A
                    T     T C C T C     A
        G A        G      | | | | |     G
      T     T C T G       A G G A G     C
      G       | | |                 T T
      G     T G A C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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