The detailed information of tRNA gene sequence


Sequence ID>WENV170719853
Genome IDLSQX01131132
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 158540
End posion on genome 158625
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gcacaagcat
tRNA gene sequence 
GCGGGGGTAGTCAAGCTGGACAACGGCGCGGGACTTAAGATCCCGTCCTTAGTGGTTCAT
GGGTTCGAATCCCATCCCCCGCACCA
Downstream region at tRNA end position 
tttttcgttc
Secondary structure (Cloverleaf model)
>WENV170719853	Leu	TAA
                   t      ACCA tttttcgttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T C G A        A      | | | | |     G
  G         A C T G       A T G G G     C
  G           | + |                 T T
  A         C G G C
    C A A          G     TCCTTAGTGGTTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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