The detailed information of tRNA gene sequence


Sequence ID>WENV170719854
Genome IDLSQX01131132
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 92534
End posion on genome 92461
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gaaccgcaat
tRNA gene sequence 
GGGCTCATGGTCTAGTGGCTATGACGTCTCCCTGACACGGAGGAGGTCGCCGGTTCGAAT
CCGGCTGAGCCCACtc
Downstream region at tRNA end position 
acttatctct
Secondary structure (Cloverleaf model)
>WENV170719854	Val	GAC
                   t      ACtc acttatctct
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    C       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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