The detailed information of tRNA gene sequence


Sequence ID>WENV170719871
Genome IDLSQX01131968
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2468
End posion on genome 2394
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taacgcacac
tRNA gene sequence 
GGTCCTATGGCTCAGTGGAAGAGCGTTCCGTTCACACCGGAAAGGTCGCTGGTTCGAACC
CAGCTAGGACCACAA
Downstream region at tRNA end position 
ccaggcccca
Secondary structure (Cloverleaf model)
>WENV170719871	Val	CAC
                   c      ACAA ccaggcccca
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     A - T          C A
                    T     C G A C C     A
        G A        G      | | | | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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