The detailed information of tRNA gene sequence


Sequence ID>WENV170719875
Genome IDLSQX01132240
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3431
End posion on genome 3505
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatctgcag
tRNA gene sequence 
GGGGCTATAGCTCAGTCGGTTAGAGCCGCGGACTCATAATCCGTAGGTCGCGGGTTCGAG
CCCCGCTGGCCCCACag
Downstream region at tRNA end position 
tcgagacccc
Secondary structure (Cloverleaf model)
>WENV170719875	Met	CAT
                   g      ACag tcgagacccc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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