The detailed information of tRNA gene sequence


Sequence ID>WENV170719877
Genome IDLSQX01132275
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 24922
End posion on genome 24846
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtccaagcgc
tRNA gene sequence 
GGAGCTGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAC
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttatattatt
Secondary structure (Cloverleaf model)
>WENV170719877	Asp	GTC
                   c      GCCA ttatattatt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C C C     A
      A G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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