The detailed information of tRNA gene sequence


Sequence ID>WENV170719904
Genome IDLSQX01133135
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 82026
End posion on genome 82113
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgcccattgc
tRNA gene sequence 
GGAGGACTGGCCGAGTGGTCGATGGCGGCTGACTTGAAATCAGTTGAGGTGCAAGCCTCC
AGGGGTTCGAATCCTCTGTCCTCCGCCA
Downstream region at tRNA end position 
ttttagaaat
Secondary structure (Cloverleaf model)
>WENV170719904	Ser	TGA
                   c      GCCA ttttagaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C G       A G G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TGAGGTGCAAGCCTCC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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