The detailed information of tRNA gene sequence


Sequence ID>WENV170719931
Genome IDLSQX01134075
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 481
End posion on genome 405
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcaaaatat
tRNA gene sequence 
GGCGGTGTAGCTTAGTTGGTCAGAGCGTCCGGTTCATACCCGGAAGGTCGGTGGTTCGAC
TCCACTCGCCGCTACCA
Downstream region at tRNA end position 
tgcggtccgg
Secondary structure (Cloverleaf model)
>WENV170719931	Met	CAT
                   t      ACCA tgcggtccgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T C
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       T T C G       G G T G G     C
    G       + | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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