The detailed information of tRNA gene sequence


Sequence ID>WENV170719964
Genome IDLSQX01135771
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 392
End posion on genome 468
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cagtcattag
tRNA gene sequence 
GGCCCGTTGGAGAAGCGGTTTAACTCACATGCCTTTCACGCATGCATGCACGGGTTCGAA
TCCCGTACGGGTCACCA
Downstream region at tRNA end position 
tttgaacaaa
Secondary structure (Cloverleaf model)
>WENV170719964	Glu	TTC
                   g      ACCA tttgaacaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      T T A        A     CATGC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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