The detailed information of tRNA gene sequence


Sequence ID>WENV170719981
Genome IDLSQX01136336
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 45932
End posion on genome 45857
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCCTCATCGTCTAGTGGTCTAGGACACCAGGTTTTCATCCTGGCGGCAGGGGTTCAAAT
CCCCTTGAGGGTGCCA
Downstream region at tRNA end position 
ttttttatgg
Secondary structure (Cloverleaf model)
>WENV170719981	Glu	TTC
                   n      GCCA ttttttatgg
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     CGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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