The detailed information of tRNA gene sequence


Sequence ID>WENV170720031
Genome IDLSQX01138108
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 15750
End posion on genome 15836
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaggtccgga
tRNA gene sequence 
GCCGAGATAGTCTAGTCCGGAAAGGCGGTGGCCTTGAAAGCCTCTGGTAGTAATACCTCG
GGAGTTCAAATCTCCCTCTCGGCGCCA
Downstream region at tRNA end position 
ttttgaatca
Secondary structure (Cloverleaf model)
>WENV170720031	Ser	TGA
                   a      GCCA ttttgaatca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGTAGTAATACCTC
                    G - C
                    T   T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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