The detailed information of tRNA gene sequence


Sequence ID>WENV170720057
Genome IDLSQX01139215
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 36904
End posion on genome 36830
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caaatcagat
tRNA gene sequence 
CGGGATGTAGCACAGTTGGCTAGCGCGCCACGTTCGGGACGTGGAGGTCGGGTGTTCGAG
TCACCTCATCCCGACag
Downstream region at tRNA end position 
aagacagaag
Secondary structure (Cloverleaf model)
>WENV170720057	Pro	CGG
                   t      ACag aagacagaag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C A C     A
      T G A        A      + | | | |     G
    T       C A C G       G G G T G     C
    G       |   | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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